Publications


[Publications in refereed journals] [Conference proceedings] [Research reports] [Edited volumes]

Publications in refereed journals

Farrell, T.L., Poquet, L., Dew, T.P., Barber, S., & Williamson, G. (2012). Predicting phenolic acid absorption in Caco-2 cells: a theoretical permeability model & mechanistic study. Drug Metabolism and Disposition 40, 397-406. doi:10.1124/dmd.111.041665.

Mardia, K.V., Nyirongo, V., Fallaize, C.J., Barber, S., & Jackson, R.M. (2011). Hierarchical Bayesian modelling of pharmacophores in bioinformatics. Biometrics 67, 611-619.
[Abstract][pdf] [supplementary information]

Barber,S.C., Higginbottom, A., Mead, R.J., Barber, S., & Shaw, P.J. (2009). An in vitro screening cascade to identify neuroprotective antioxidants in ALS. Free Radical Biology & Medicine 46 1127-1138.

Walls, R.E., Barber, S., Kent, J.T. & Gilthorpe, M.S. (2007). An adaptive empirical Bayesian thresholding procedure for analysing microarray experiments with replication. Journal of the Royal Statistical Society, Series C. 56, 271-291.
[Abstract] [pdf]

Barber, S. & Nason, G.P. (2004). Real nonparametric regression with complex wavelets. Journal of the Royal Statistical Society, Series B. 66, 927-939.
[Abstract] [pdf] [ps] [Download software]

Barber, S., Nason, G.P., & Silverman, B.W. (2002). Posterior probability intervals for wavelet thresholding. Journal of the Royal Statistical Society, Series B. 64, 189-205.
[Abstract] [pdf] [ps] [Download software].

Barber, S., & Jennison, C. (2002). Optimal asymmetric one-sided group sequential tests. Biometrika 89, 49-60.
[Abstract] [pdf] [ps] [Download software].

Barber, S., & Jennison, C. (1999). Symmetric tests and confidence intervals for survival probabilities and quantiles of censored survival data. Biometrics 55, 430-436.
[Abstract] [pdf] [ps]


Conference proceedings

Burdett, P.M., Mardia, K.V., & Barber, S. (2011). Mixture models for spherical data with applications to protein bioinformatics In Mardia, K.V., Gusnanto, A., Riley, A.D., & Voss, J. (eds), Next Generation Statistics in Biosciences, p. 149, Leeds, Leeds University Press.
[
pdf]

Klapper, J.H. & Barber, S. (2011). Multi-scale analysis of high performance liquid chromatography data In Mardia, K.V., Gusnanto, A., Riley, A.D., & Voss, J. (eds), Next Generation Statistics in Biosciences, p. 164, Leeds, Leeds University Press.
[
pdf]

Klapper, J.H. & Barber, S. (2010). A multi-scale approach to analysing High Performance Liquid Chromatography data In Gusnanto, A., Mardia, K.V., Fallaize, C.J., & Voss, J. (eds), High-throughput Sequencing, Proteins and Statistics, pp. 114-116, Leeds, Leeds University Press.
[
pdf]

Mardia, K.V., Fallaize, C.J., Barber, S., Jackson, R.M., & Theobald, D.L. (2010). Bayesian alignment of unlabelled similarity shapes In Gusnanto, A., Mardia, K.V., Fallaize, C.J., & Voss, J. (eds), High-throughput Sequencing, Proteins and Statistics, pp. 121, Leeds, Leeds University Press.
[
pdf]

Aykroyd, R.G., Barber, S., Northing,P., Murray, A., & Peck, S.J. (2009). A multiscale method for spatial imputation applied to environmental data. In A. Gusnanto, K.V. Mardia, & C.J. Fallaize (eds), Statistical Tools for Challenges in Bioinformatics, pp.98-100. Leeds, Leeds University Press.
[
pdf]

Mardia, K.V., Nyirongo, V.B., Fallaize, C.J., Barber, S., and Jackson, R.M. (2009). Hierarchical Bayesian modelling of pharmacophores. In A. Gusnanto, K.V. Mardia, & C.J. Fallaize (eds), Statistical Tools for Challenges in Bioinformatics, pp.111-112. Leeds, Leeds University Press.
[
pdf]

Aykroyd, R.G., Barber, S., & Peck, S.J. (2008). Imputation on 2-dimensional data via lifting. In S. Barber, P.D. Baxter, A. Gusnanto & K.V. Mardia (eds), The Art and Science of Statistical Bioinformatics, pp.77-80. Leeds, Leeds University Press.
[
pdf]

Peck, S.J., Barber, S., & Aykroyd, R.G. (2007). Lifting based imputation for peak inference on HPLC data In S. Barber, P.D. Baxter, & K.V.Mardia (eds), Systems Biology & Statistical Bioinformatics, pp. 134. Leeds, Leeds University Press.
[
pdf]

Walls, R.E., Barber, S., Gilthorpe, M.S., & Kent,J.T. (2007). Statistical analysis of high performance liquid chromatography data In S. Barber, P.D. Baxter, & K.V.Mardia (eds), Systems Biology & Statistical Bioinformatics, pp. 144. Leeds, Leeds University Press.
[
pdf]

Goodwin, A., Aykroyd, R.G. & Barber, S. (2006). Prediction from local frequency characteristics of multiple time series In Barber, S., Baxter, P.D., Mardia, K.V., & Walls, R.E. (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 116-119. Leeds, Leeds University Press.
[
pdf]

Walls, R.E., Barber, S., Gilthorpe, M.S. & Kent, J.T. (2006). Analysis of microarray data by an adaptive empirical Bayesian thresholding procedure In Barber, S, Baxter, P.D., Mardia, K.V., & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 175-177. Leeds, Leeds University Press.
[
pdf]

Goodwin, D.A., Aykroyd, R.G. & Barber, S. (2005). Modelling and predicting flow regimes using wavelet representations of ERT data In de Jong, A., Williams, R.A., & Zeidan, M. (Eds) Proceedings of the 4th World Congress on Industrial Process Tomography, pp. 904-909
[
Abstract] [pdf] [ps]

Walls, R.E., Barber, S., Gilthorpe, M.S. & Kent, J.T. (2005). Analysis of microarray data In S. Barber, P.D. Baxter, K.V. Mardia, & R.E. Walls (Eds.), Quantitative Biology, Shape Analysis, and Wavelets, pp. 168-171. Leeds, Leeds University Press.
[
pdf]

Goodwin, A., Barber, S., & Aykroyd, R.G. (2005). Modelling and predicting flow regimes using wavelet representations of ERT data In S. Barber, P.D. Baxter, K.V. Mardia, & R.E. Walls (Eds.), Quantitative Biology, Shape Analysis, and Wavelets, pp. 134-137. Leeds, Leeds University Press.
[
pdf]

Goodwin, D.A., Barber, S., & Aykroyd, R.G. (2004). Wavelet packet modelling of seismic data. In R.G. Aykroyd, S. Barber, & K.V. Mardia (Eds.), Bioinformatics, Images, and Wavelets, pp. 126-129. Department of Statistics, University of Leeds.
[
pdf]

Barber, S. & Nason, G.P. (2003a). Denoising Real Images Using Complex-Valued Wavelets. In R.G. Aykroyd, K.V. Mardia and M.J. Langdon (Eds.), Stochastic Geometry, Biological Structure and Images, 91-95. Department of Statistics, University of Leeds.
[
Abstract] [pdf]

Barber, S., & Jennison, C. (1998). Bootstrapping the Kaplan-Meier estimator. In Payne, R. & Green, P.J. (eds) Compstat 1998: Proceedings in Computational Statistics, vol. 2 139-140.
[Abstract] [pdf] [ps]


Research reports

Goodwin, D.A., Barber, S., & Aykroyd, R.G. (2006). Modelling and predicting flow regimes using wavelet representations Research report STAT06-17 Department of Statistics, University of Leeds, U.K.
[Abstract] [pdf]

Aykroyd, R.G., Barber, S., Cattle, B.A., Goodwin, D.A., & West, R.M. (2006). Recent advances in statistical modelling and analysis for electrical tomography without image reconstruction Research report STAT06-12 Department of Statistics, University of Leeds, U.K.
[Abstract] [pdf]

Walls, R.E., Barber, S., Gilthorpe, M.S., & Kent, J.T. (2006). An adaptive empirical Bayesian thresholding procedure for analysing microarray experiments with replication Research report STAT06-02 Department of Statistics, University of Leeds, U.K.
[Abstract] [pdf][updated pdf]

Marchant, P, Baxter, P.D., & Barber, S. (2006). Some statistical issues in the assessment of crime reduction interventions Research report STAT06-01 Department of Statistics, University of Leeds, U.K.
[Abstract] [pdf][ updated pdf]

Barber, S. & Nason, G.P. (2003b). Appendix to Real nonparametric regression using complex wavelets Research report 03:13, Statistics Group, University of Bristol, U.K.
[pdf]

Barber, S. & Nason, G.P. (2003c). Simulations comparing thresholding methods using real and complex wavelets. Research report 03:07, Statistics Group, University of Bristol, U.K.
[pdf]

Barber, S. (2003). An analysis of group size models for optimal group sequential clinical trials. Research report 03:01, Statistics Group, University of Bristol, U.K.
[pdf]

Barber, S. (2001). Simulating from the posterior density of Bayesian wavelet regression estimates. Research report 01:29, Statistics Group, University of Bristol, U.K.
[Abstract] [pdf] [ps]

Barber, S. (2001). OGSeT: Software for optimal group sequential clinical trials . Research report 01:18, Statistics Group, University of Bristol, U.K.
Download software as a [gzipped tar file]

Barber, S., & Jennison, C. (1998). A review of inferential methods for the Kaplan-Meier estimator. Research report 98:02, Statistics group, University of Bath, U.K..
[Abstract] [pdf] [ps]


Edited volumes

Barber, S., Baxter, P.D., Gusnanto, A., & Mardia, K.V. (eds) (2008). The Art and Science of Statistical Bioinformatics, Leeds, Leeds University Press.

Barber, S., Baxter, P.D., & Mardia, K.V. (eds) (2007). Systems Biology & Statistical Bioinformatics, Leeds, Leeds University Press.

Barber, S., Baxter, P.D., Mardia, K.V., & Walls, R.E. (eds) (2006). Interdisciplinary Statistics and Bioinformatics. Leeds, Leeds University Press.

Barber, S., Baxter, P.D., Mardia, K.V., & Walls, R.E. (eds) (2005). Quantitative Biology, Shape Analysis, and Wavelets. Leeds, Leeds University Press.

Aykroyd, R.G., Barber, S., & Mardia, K.V. (eds) (2004). Bioinformatics, Images, and Wavelets. Leeds, Leeds University Press.


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