Interdiciplinary Statistics and Bioinformatics

To obtain a copy of the Workshop Programme and Abstracts booklet either download the whole proceedings booklet (without the covers), or download individual files for selected papers.

We hope that you find these papers useful. If you do, then please give full acknowledgment using the bibliographic information as indicated below.

Entire proceedings booklet

Front and back covers
Full LASR2006 booklet (c3.6MB).


INDIVIDUAL PDF FILES

Extra pages

Covers; Front matter (title page, preface, timetable etc) ; List of Participants; Author Index.

Papers

Mardia, K.V. (2006). LASR Workshop's silver anniversary and beyond In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 9-15. Leeds, Leeds University Press.

Mardia, K.V. (2006). What is statistical bioinformatics? In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 17-24. Leeds, Leeds University Press.

McLeish, T.C.B. & Hawkins, R. (2006). Can coiled coils transfer both mechanical strength and information simultaneously? In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 25. Leeds, Leeds University Press.

Linney, A.D., McDonald, D. & Wright, A. (2006). Alter ego - live video classification of facial expression In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 31-34. Leeds, Leeds University Press.

Holden, A.V. (2006). Mapping three-dimensional spatio-temporal dynamics in the heart: one or 113,895 types of sudden cardiac death? In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 35-38. Leeds, Leeds University Press.

Gottardo, R, Li, W. & Johnson, E. (2006). Bayesian analysis of ChIP-chip experiments In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 39. Leeds, Leeds University Press.

Bowman, C., Delrieu, O. & Roger, J. (2006). Filtering pharmacogenetic signals In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 41-47. Leeds, Leeds University Press.

Thornton, J., Schuster, E. & Blanc, E. (2006). Challenges in short-oligonucleotide microarray data normalisation In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 51. Leeds, Leeds University Press.
An updated and extended version of this paper was received after the proceedings went to press.

Lewin, A., Kulinskaya, E. & Grieve, I. (2006). Improving statistical assessment of gene set enrichment for Gene Ontology categories and gene expression data In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 53-54. Leeds, Leeds University Press.

Barrett, J.H. (2006). Some current and future statistical challenges in genomics and proteomics In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 55-58. Leeds, Leeds University Press.

Cox, D.R. (2006). Some statistical aspects of a problem in veterinary epidemiology In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 61. Leeds, Leeds University Press.

Navarro, N. & Klingenberg, C.P. (2006). Combining geometric morphometrics and genomic data: The genetics of mouse mandible shape In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 63-66. Leeds, Leeds University Press.

Bookstein, F.L. (2006). Shape changes in the evolutionary/developmental sciences: intrinsic random fields in morphometrics, with a methodological justification In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 67-70. Leeds, Leeds University Press.

Glasbey, C.A. (2006). Warping of electrophoresis gels using generalisations of dynamic programming In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 71-74. Leeds, Leeds University Press.

Kent, J.T. & Mardia, K.V. (2006). A new representation for projective shape In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 75-78. Leeds, Leeds University Press.

Besag, J. & Gottardo, R. (2006). Probabilistic segmentation and intensity estimation for microarray images In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 81. Leeds, Leeds University Press.

Panaretos, V.M. (2006). Diffusions in shape space induced from projections In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 83. Leeds, Leeds University Press.

Schmid, V.J., Whitcher, B. & Yang, G.-Z. (2006). A Bayesian framework for pharmacokinetic modelling in dynamic contrast-enhanced magnetic resonance cancer imaging In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 85. Leeds, Leeds University Press.
An extended and updated version of this paper is now available.

Pinney, J.W. & Westhead, D.R. (2006). Betweenness-based decomposition methods for social and biological networks In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 87-90. Leeds, Leeds University Press.

Boomsma, W., Kent, J.T., Mardia, K.V., Taylor, C.C. & Hamelryck, T. (2006). Graphical models and directional statistics capture protein structure In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 91-94. Leeds, Leeds University Press.

Westhead, D.R., Bulpitt, A.J., Bradford, J.R. & Needham, C.J. (2006). Protein function prediction in Arabidopsis thaliana In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 95-96. Leeds, Leeds University Press.

Goodfellow, J.M. (2006). Data rich but maths poor In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 99-100. Leeds, Leeds University Press.

Gilks, W.R., Nye, T.M.W. & Lio, P. (2006). Reconstructing phylogenetic trees from distance matrices, incorporating uncertainty In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 101-103. Leeds, Leeds University Press.

Atwell, E., Shawar, B.A.,Roberts, A. & Al-Sulaiti, L. (2006). Unsupervised learning of linguistic significance In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 107. Leeds, Leeds University Press.

Blangiardo, M. & Richardson, S. (2006). Comparison of lists of differentially expressed genes In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 108-111. Leeds, Leeds University Press.

Bradford, J.R., Needham, C.J., Bulpitt, A.J. & Westhead, D.R. (2006). Insights into protein-protein interfaces using a Bayesian network prediction method In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 112. Leeds, Leeds University Press.

Care, M. & Westhead, D.R. (2006). Predicting deleterious SNPs In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 113. Leeds, Leeds University Press.

Davies, J., Jackson, R.M., Mardia, K.V. & Taylor, C.C. (2006). Statistical comparison of protein binding sites In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 114-115. Leeds, Leeds University Press.

Goodwin, A., Aykroyd, R.G. & Barber, S. (2006). Prediction from local frequency characteristics of multiple time series In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 116-119. Leeds, Leeds University Press.

Hughes, G., Mardia, K.V. & Taylor, C.C. (2006). Modeling protein folds with a trivariate von Mises distribution In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 120-123. Leeds, Leeds University Press.

Hyland, C., McConkey, G. & Westhead, D.R. (2006). Metabolic reconstruction and analysis using gene expression data In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 124. Leeds, Leeds University Press.

Illian, J.B. (2006). Spatial point process modelling in the context of biodiversity theory In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 125-127. Leeds, Leeds University Press.

Luo, W., Baxter, P.D. & Taylor, C.C. (2006). Regression models for high dimensional data -- a simulation study In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 128-131. Leeds, Leeds University Press.

Macarthur, R., Murray, A.W.A., Allnutt, T.R., Deppe, C., Hird, H.J., Kerins, G.M., Blackburn, J., Brown, J, Stones, R. & Hugo, S. (2006). Assuring the performance of GM event detection systems In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 132. Leeds, Leeds University Press.

Manning, J. & Barton, G.J. (2006). Prediction of functional sites from protein multiple sequence alignments In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 133-136. Leeds, Leeds University Press.

Mardikian, S., Gillet, V.J., Jackson, R.M. & Westhead, D.R. (2006). Using multiobjective optimization to study the strengths of different interaction energies in protein-ligand complexes In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 137. Leeds, Leeds University Press.

Mosamam, A.M. & Kent, J.T. (2006). Asymmetric space-time models In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 138-141. Leeds, Leeds University Press.

Muino, J. & Krajewski, P. (2006). Improving Cox and Wong's method: Estimating the proportion of true null hypotheses with the method of moments In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 142-145. Leeds, Leeds University Press.

Palaniswamy, S., Thacker, N.A. & Klingenberg, C.P. (2006). A statistical approach to feature detection in digital images In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 146-149. Leeds, Leeds University Press.

Petty, E.M., Mardia, K.V., Taylor, C.C. & Chaudhry, Q. (2006). Matching pesticides to proteins to predict toxicity In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 150-153. Leeds, Leeds University Press.

Pinney, J.W., Rattray, M. & Robertson, D.L. (2006). Understanding the evolution of protein interaction networks In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 153-156. Leeds, Leeds University Press.

Rella, M., Rushworth, C., Guy, J., Turner, A., Langer, T. & Jackson, R.M. (2006). Identification of novel ACE2 inhibitors by structure-based pharmacophore modelling and virtual screening In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 157. Leeds, Leeds University Press.

Savriama, Y. & Klingenberg, C.P. (2006). Geometric morphometrics of complex symmetric structures: Shape analysis of symmetry and asymmetry with Procrustes methods In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 158-161. Leeds, Leeds University Press.

Shuweihdi, F. & Taylor, C.C. (2006). Measure of performance for kernel clustering In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 162-165. Leeds, Leeds University Press.

Stones, R., Charlton, A. & Donarski, J. (2006). NMR Manager -- Metabolomics software for interpreting complex NMR In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 166-167. Leeds, Leeds University Press.

Su, Z. & Bogachev, L.B. (2006). Gaussian fluctuations for random partitions In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 168-171. Leeds, Leeds University Press.

Subramaniam, G. & Varadhan, R. (2006). Identification of anomalous time series using functional data analysis In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 172-173. Leeds, Leeds University Press.

Umande, P. (2006). Edge correcting in 3 dimensions In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 174. Leeds, Leeds University Press.

Walls, R.E., Barber, S., Gilthorpe, M.S. & Kent, J.T. (2006). Analysis of microarray data by an adaptive empirical Bayesian thresholding procedure In S. Barber, P.D. Baxter, K.V.Mardia, & R.E. Walls (Eds.), Interdisciplinary Statistics and Bioinformatics, pp. 175-177. Leeds, Leeds University Press.


Page maintained by Stuart Barber. Please send any comment or questions to workshop @ maths.leeds.ac.uk
Back to the LASR 2006 home page or the Leeds Annual Statistical Research Workshop homepage
Last modified: Thu Jul 13 16:49:55 BST 2006